Difference between revisions of "HAMR: Human/Authority Metadata Reconciliation"
From Code4Lib
| Line 12: | Line 12: | ||
Possible authority sources: | Possible authority sources: | ||
| − | * | + | * PubMed |
** Sample pubmed query (in Java): [https://wiki.duraspace.org/display/DSPACE/PubMedPrefill-PubmedPrefillStep.java DSpace PubMedPrefillStep.java] (From [https://wiki.duraspace.org/display/DSPACE/PopulateMetadataFromPubMed Populate Metadata from PubMed]) | ** Sample pubmed query (in Java): [https://wiki.duraspace.org/display/DSPACE/PubMedPrefill-PubmedPrefillStep.java DSpace PubMedPrefillStep.java] (From [https://wiki.duraspace.org/display/DSPACE/PopulateMetadataFromPubMed Populate Metadata from PubMed]) | ||
*** See 'retrievePubmedXML()' in above java code for actual call to PubMed | *** See 'retrievePubmedXML()' in above java code for actual call to PubMed | ||
*** Mapping happens here: See [https://wiki.duraspace.org/display/DSPACE/PubMedPrefill-pmid+dim.xsl pmid-to-dim.xsl] for a sample XSLT crosswalk to translate PubMed format to a qualified dublin core (internal DSpace metadata format) | *** Mapping happens here: See [https://wiki.duraspace.org/display/DSPACE/PubMedPrefill-pmid+dim.xsl pmid-to-dim.xsl] for a sample XSLT crosswalk to translate PubMed format to a qualified dublin core (internal DSpace metadata format) | ||
** More examples of querying PubMed: http://www.my-whiteboard.com/how-to-automate-pubmed-search-using-perl-php-or-java/ | ** More examples of querying PubMed: http://www.my-whiteboard.com/how-to-automate-pubmed-search-using-perl-php-or-java/ | ||
| − | * | + | * CrossRef |
** simply send the DOI to crossref, and get JSON/XML back | ** simply send the DOI to crossref, and get JSON/XML back | ||
*** http://api.labs.crossref.org/10.1111/j.1558-5646.2009.00626.x.json | *** http://api.labs.crossref.org/10.1111/j.1558-5646.2009.00626.x.json | ||
| Line 23: | Line 23: | ||
*** [http://code.google.com/p/dryad/source/browse/trunk/dryad/dspace/modules/doi/dspace-doi-webapp/src/main/java/org/dspace/doi/DOIServlet.java java code that includes a lookup] | *** [http://code.google.com/p/dryad/source/browse/trunk/dryad/dspace/modules/doi/dspace-doi-webapp/src/main/java/org/dspace/doi/DOIServlet.java java code that includes a lookup] | ||
** [http://labs.crossref.org/site/crossref_metadata_search.html Metadata Search] -- send a text query, receive a list of matching records | ** [http://labs.crossref.org/site/crossref_metadata_search.html Metadata Search] -- send a text query, receive a list of matching records | ||
| + | ** [http://labs.crossref.org/site/quick_and_dirty_api_guide.html OpenURL search] | ||
* google scholar - does it have an API? | * google scholar - does it have an API? | ||
* [http://www.mendeley.com mendeley] - [http://dev.mendeley.com/ Mendeley API] | * [http://www.mendeley.com mendeley] - [http://dev.mendeley.com/ Mendeley API] | ||
Revision as of 16:11, 7 February 2011
HAMR: Human/Authority Metadata Reconciliation
Sean Chen, Tim Donohue, Joshua Gomez, Ranti Junus, Ryan Scherle
A tool for a curator to determine whether the various fields of a metadata record are correct. Takes a metadata record, locates any identifiers (e.g., DOI, PMID). Retrieves a copy of the metadata record from an authoritative source (e.g., CrossRef, PubMed). Displays a human-readable page that compares fields in the initial record with fields in the authoritative record. Each field is color-coded based on how well it matches, so the curator can quickly identify discrepancies.
Focus:
- Dublin core (maybe qualified)
- framework that allows multiple authority sources
- NOT focusing on author names (ORCID is already working on this), except the fact that they are strings, and we'll do basic string matching
Possible authority sources:
- PubMed
- Sample pubmed query (in Java): DSpace PubMedPrefillStep.java (From Populate Metadata from PubMed)
- See 'retrievePubmedXML()' in above java code for actual call to PubMed
- Mapping happens here: See pmid-to-dim.xsl for a sample XSLT crosswalk to translate PubMed format to a qualified dublin core (internal DSpace metadata format)
- More examples of querying PubMed: http://www.my-whiteboard.com/how-to-automate-pubmed-search-using-perl-php-or-java/
- Sample pubmed query (in Java): DSpace PubMedPrefillStep.java (From Populate Metadata from PubMed)
- CrossRef
- simply send the DOI to crossref, and get JSON/XML back
- Metadata Search -- send a text query, receive a list of matching records
- OpenURL search
- google scholar - does it have an API?
- mendeley - Mendeley API
- vivo
- bibapp
Thoughts / Questions:
- Is there a way to do most/all of this via Javascript/AJAX/JQuery? Could it be a simple Javascript framework you could "drop" into any metadata editing interface?
